Solyc04g025170.4.1 (Solyc04g025170)

Aliases : Solyc04g025170

Description : subfamily ABCG transporter

Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g025170.4.1
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AT2G37010	ATNAP12, NAP12	non-intrinsic ABC protein 12	0.03	OrthoFinder output from all 47 species
AT5G60740	No alias	ABC transporter family protein	0.03	OrthoFinder output from all 47 species
Adi_g055915	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g13432	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0002.g001308	No alias	subfamily ABCG transporter & original description: CDS=291-3659	0.04	OrthoFinder output from all 47 species
Ceric.02G069600.1	Ceric.02G069600	subfamily ABCG transporter & original description:...	0.05	OrthoFinder output from all 47 species
GSVIVT01025230001	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
LOC_Os04g11820.1	LOC_Os04g11820	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
LOC_Os10g30610.1	LOC_Os10g30610	subfamily ABCG transporter	0.06	OrthoFinder output from all 47 species
Msp_g14714	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g25783	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63521	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05945	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000042	No alias	subfamily ABCG transporter & original description: CDS=968-4330	0.02	OrthoFinder output from all 47 species
Solyc09g008000.3.1	ATNAP12, NAP12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Spa_g12371	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02193	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e008651_P001	Zm00001e008651	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e037060_P003	Zm00001e037060	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	229	356

External Links

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Solyc04g025170.4.1 (Solyc04g025170)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation