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  5. Solyc04g024780.1.1

Solyc04g024780.1.1 (Solyc04g024780)


Aliases : Solyc04g024780

Description : no hits & (original description: none)


Gene families : OG0009517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g024780.1.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT1G23710 No alias Protein of unknown function (DUF1645) 0.05 OrthoFinder output from all 47 species
AT1G70420 No alias Protein of unknown function (DUF1645) 0.09 OrthoFinder output from all 47 species
AT3G27880 No alias Protein of unknown function (DUF1645) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45250.1 LOC_Os01g45250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g49350.1 LOC_Os05g49350 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g49370.1 LOC_Os05g49370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g50230.1 LOC_Os05g50230 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g24889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114350.1.1 Solyc03g114350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e020252_P001 Zm00001e020252 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e020361_P001 Zm00001e020361 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027955_P001 Zm00001e027955 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 126 314
No external refs found!