Solyc04g011670.3.1 (TGA1, Solyc04g011670)


Aliases : TGA1, Solyc04g011670

Description : transcription factor (bZIP). transcription factor (TGA)


Gene families : OG0000342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g011670.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00231750 OBF4, TGA4,... RNA biosynthesis.transcriptional activation.bZIP... 0.06 OrthoFinder output from all 47 species
AT1G08320 bZIP21, TGA9 bZIP transcription factor family protein 0.06 OrthoFinder output from all 47 species
AT1G22070 TGA3 TGA1A-related gene 3 0.03 OrthoFinder output from all 47 species
AT3G12250 BZIP45, TGA6 TGACG motif-binding factor 6 0.05 OrthoFinder output from all 47 species
AT5G06839 TGA10, bZIP65 bZIP transcription factor family protein 0.04 OrthoFinder output from all 47 species
AT5G65210 TGA1 bZIP transcription factor family protein 0.05 OrthoFinder output from all 47 species
Adi_g057891 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g080369 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23945 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene23588.t1 TGA2, AHBP-1B,... NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene40163.t1 TGA2, AHBP-1B,... TGA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G055300.1 TGA2, AHBP-1B,... TGA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g14784 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g21289 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04779 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10259 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g15547 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26684 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011929001 PAN RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
GSVIVT01033632001 TGA2, AHBP-1B RNA biosynthesis.transcriptional activation.bZIP... 0.05 OrthoFinder output from all 47 species
GSVIVT01036134001 bZIP21, TGA9 RNA biosynthesis.transcriptional activation.bZIP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g10140.1 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.06 OrthoFinder output from all 47 species
LOC_Os02g10150.1 bZIP21, TGA9,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g15480.2 PAN, LOC_Os06g15480 transcription factor (bZIP). transcription factor (TGA).... 0.03 OrthoFinder output from all 47 species
LOC_Os06g41100.1 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
LOC_Os11g05480.1 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
LOC_Os12g05680.1 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.06 OrthoFinder output from all 47 species
Len_g58934 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.05 OrthoFinder output from all 47 species
MA_101958g0010 TGA10, bZIP65 transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
MA_10428126g0010 TGA2, AHBP-1B transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
MA_130907g0010 bZIP21, TGA9 transcription factor (bZIP). transcription factor (TGA).... 0.03 OrthoFinder output from all 47 species
Nbi_g03625 BZIP45, TGA6 TGA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24285 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Ore_g08289 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.02 OrthoFinder output from all 47 species
Ore_g32561 TGA2, AHBP-1B NPR1-interactive transcription factor *(TGA) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16058 No alias TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16059 No alias TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo404596 TGA2, AHBP-1B RNA biosynthesis.transcriptional activation.bZIP... 0.03 OrthoFinder output from all 47 species
Solyc04g054320.4.1 TGA1, Solyc04g054320 transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Solyc05g009660.4.1 PAN, Solyc05g009660 transcription factor (bZIP). transcription factor (TGA).... 0.04 OrthoFinder output from all 47 species
Solyc11g068370.3.1 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Spa_g22901 TGA2, AHBP-1B TGA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014085_P001 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Zm00001e019207_P002 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
Zm00001e024141_P002 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Zm00001e031761_P001 bZIP21, TGA9,... transcription factor (bZIP). transcription factor (TGA) 0.04 OrthoFinder output from all 47 species
Zm00001e037595_P002 TGA10, bZIP65,... transcription factor (bZIP). transcription factor (TGA) 0.03 OrthoFinder output from all 47 species
Zm00001e039374_P001 bZIP21, TGA9,... transcription factor (TGA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 88 118
IPR025422 TGA_domain 175 250
No external refs found!