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  5. Solyc04g010080.3.1

Solyc04g010080.3.1 (Solyc04g010080)


Aliases : Solyc04g010080

Description : diphthamide synthetase (DPH6)


Gene families : OG0005519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g010080.3.1

Target Alias Description ECC score Gene Family Method Actions
Lfl_g27422 No alias diphthamide synthetase *(DPH6) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g15653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006175 YjgF/YER057c/UK114 324 396
IPR006175 YjgF/YER057c/UK114 427 555
IPR002761 Diphthami_syn_dom 1 227
No external refs found!