Solyc04g007550.4.1 (Solyc04g007550)

Aliases : Solyc04g007550

Description : subunit beta of ATP synthase peripheral MF1 subcomplex

Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g007550.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00059970	evm_27.TU.AmTr_v1...	Cellular respiration.oxidative phosphorylation.ATP...	0.03	OrthoFinder output from all 47 species
AT5G08670	No alias	ATP synthase alpha/beta family protein	0.21	OrthoFinder output from all 47 species
AT5G08680	No alias	ATP synthase alpha/beta family protein	0.21	OrthoFinder output from all 47 species
AT5G08690	No alias	ATP synthase alpha/beta family protein	0.22	OrthoFinder output from all 47 species
Adi_g057360	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g40986	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ala_g02159	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Als_g06592	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g15371	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Als_g41810	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g61400	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01310	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.06	OrthoFinder output from all 47 species
Azfi_s0004.g008388	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.09	OrthoFinder output from all 47 species
Cba_g57222	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ceric.02G065800.1	Ceric.02G065800	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.1	OrthoFinder output from all 47 species
Ceric.13G079900.1	Ceric.13G079900	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.11	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001376.2	No alias	ATP synthase subunit beta, mitochondrial...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001376.3	No alias	ATP synthase subunit beta, mitochondrial...	0.05	OrthoFinder output from all 47 species
Cre17.g698000	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.12	OrthoFinder output from all 47 species
Dcu_g11062	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.07	OrthoFinder output from all 47 species
Ehy_g09817	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Ehy_g09885	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
GSVIVT01008378001	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.06	OrthoFinder output from all 47 species
GSVIVT01011797001	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.1	OrthoFinder output from all 47 species
Gb_07287	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.07	OrthoFinder output from all 47 species
LOC_Os01g49190.1	LOC_Os01g49190	subunit beta of ATP synthase peripheral MF1 subcomplex	0.14	OrthoFinder output from all 47 species
LOC_Os05g47980.1	LOC_Os05g47980	subunit beta of ATP synthase peripheral MF1 subcomplex	0.18	OrthoFinder output from all 47 species
Len_g09540	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Lfl_g03155	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
MA_11179g0010	No alias	ATP synthase subunit beta, mitochondrial OS=Nicotiana...	0.06	OrthoFinder output from all 47 species
Mp2g15450.1	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex	0.17	OrthoFinder output from all 47 species
Msp_g33452	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Msp_g34161	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g36168	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.05	OrthoFinder output from all 47 species
Nbi_g06174	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.05	OrthoFinder output from all 47 species
Nbi_g07826	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Nbi_g15676	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ore_g20278	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Ore_g20279	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25290	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Pir_g12123	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Sam_g17065	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.03	OrthoFinder output from all 47 species
Smo139657	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.1	OrthoFinder output from all 47 species
Spa_g14674	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.05	OrthoFinder output from all 47 species
Spa_g26323	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Tin_g04477	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.06	OrthoFinder output from all 47 species
Tin_g04616	No alias	subunit beta of ATP synthase peripheral MF1 subcomplex &...	0.04	OrthoFinder output from all 47 species
Zm00001e020138_P001	Zm00001e020138	subunit beta of ATP synthase peripheral MF1 subcomplex	0.03	OrthoFinder output from all 47 species
Zm00001e032346_P003	Zm00001e032346	subunit beta of ATP synthase peripheral MF1 subcomplex	0.22	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
MF	GO:0008443	phosphofructokinase activity	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0016052	carbohydrate catabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	94	160
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	217	438
IPR020971	ATP_synth_F1_beta_su	1	51

External Links

No external refs found!

Solyc04g007550.4.1 (Solyc04g007550)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation