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  5. Solyc04g007150.3.1

Solyc04g007150.3.1 (ATXYL1, XYL1, TRG1,...)


Aliases : ATXYL1, XYL1, TRG1, Solyc04g007150

Description : 1,6-alpha-xylosidase


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007150.3.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.04 OrthoFinder output from all 47 species
Als_g08905 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G047500.1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g12611 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17771 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30299 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species
LOC_Os06g46340.1 LOC_Os06g46340 Probable alpha-glucosidase Os06g0675700 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Lfl_g13282 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38030 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56465 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c2_18590V3.1 ATXYL1, XYL1,... alpha-xylosidase 1 0.01 OrthoFinder output from all 47 species
Smo79855 ATXYL1, XYL1, TRG1 Cell wall.hemicellulose.xyloglucan.modification and... 0.02 OrthoFinder output from all 47 species
Solyc04g009630.3.1 Solyc04g009630 Alpha-glucosidase OS=Spinacia oleracea... 0.04 OrthoFinder output from all 47 species
Spa_g18091 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017022_P001 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR031727 Gal_mutarotase_N 52 188
IPR000322 Glyco_hydro_31 281 591
IPR025887 Glyco_hydro_31_N_dom 192 260
No external refs found!