Solyc04g005160.3.1 (Solyc04g005160)

Aliases : Solyc04g005160

Description : 6-phosphogluconate dehydrogenase

Gene families : OG0000965 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000965_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g005160.3.1
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00182310	evm_27.TU.AmTr_v1...	Carbohydrate metabolism.oxidative pentose phosphate...	0.04	OrthoFinder output from all 47 species
AT3G02360	No alias	6-phosphogluconate dehydrogenase family protein	0.03	OrthoFinder output from all 47 species
Adi_g021904	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082422	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Adi_g083974	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aev_g29969	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Ala_g13319	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aob_g03203	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aop_g36458	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Azfi_s0454.g071293	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Cba_g03841	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Ceric.25G061600.1	Ceric.25G061600	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Cre12.g526800	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.01	OrthoFinder output from all 47 species
Ehy_g01268	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.01	OrthoFinder output from all 47 species
GSVIVT01010170001	No alias	6-phosphogluconate dehydrogenase, decarboxylating 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01010171001	No alias	6-phosphogluconate dehydrogenase, decarboxylating 1...	0.03	OrthoFinder output from all 47 species
Gb_19037	No alias	6-phosphogluconate dehydrogenase	0.02	OrthoFinder output from all 47 species
LOC_Os06g02144.1	LOC_Os06g02144	6-phosphogluconate dehydrogenase	0.08	OrthoFinder output from all 47 species
Mp5g10660.1	No alias	6-phosphogluconate dehydrogenase	0.03	OrthoFinder output from all 47 species
Ore_g19388	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Sam_g19209	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Smo168478	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.05	OrthoFinder output from all 47 species
Smo98399	No alias	Carbohydrate metabolism.oxidative pentose phosphate...	0.03	OrthoFinder output from all 47 species
Spa_g11360	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Spa_g39244	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
MF	GO:0050661	NADP binding	IEA	Interproscan
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004325	ferrochelatase activity	IEP	HCCA
MF	GO:0004568	chitinase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006022	aminoglycan metabolic process	IEP	HCCA
BP	GO:0006026	aminoglycan catabolic process	IEP	HCCA
BP	GO:0006030	chitin metabolic process	IEP	HCCA
BP	GO:0006032	chitin catabolic process	IEP	HCCA
BP	GO:0006040	amino sugar metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0006783	heme biosynthetic process	IEP	HCCA
MF	GO:0008061	chitin binding	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
BP	GO:0015693	magnesium ion transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042168	heme metabolic process	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046348	amino sugar catabolic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	HCCA
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006114	6PGDH_C	169	462
IPR006115	6PGDH_NADP-bd	1	164

External Links

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Solyc04g005160.3.1 (Solyc04g005160)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation