1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g120600.4.1

Solyc03g120600.4.1 (Solyc03g120600)


Aliases : Solyc03g120600

Description : Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana (sp|q9m815|pcr8_arath : 208.0)


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g120600.4.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.04 OrthoFinder output from all 47 species
AT1G49030 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.06 OrthoFinder output from all 47 species
AT3G18460 No alias PLAC8 family protein 0.06 OrthoFinder output from all 47 species
Aob_g21203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19410 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene15484.t1 Aspi01Gene15484 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72736.t1 Aspi01Gene72736 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G039000.1 Ceric.05G039000 not classified & original description: pacid=50578200... 0.03 OrthoFinder output from all 47 species
Ceric.07G075800.1 Ceric.07G075800 not classified & original description: pacid=50626192... 0.05 OrthoFinder output from all 47 species
Dcu_g36018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44754 PCR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011687001 PCR2 Cell number regulator 2 OS=Zea mays 0.07 OrthoFinder output from all 47 species
GSVIVT01011927001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01011928001 No alias Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031753001 No alias Cell number regulator 1 OS=Zea mays 0.06 OrthoFinder output from all 47 species
GSVIVT01031754001 PCR2 Cell number regulator 1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Gb_37164 No alias Cell number regulator 2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Gb_37165 No alias Cell number regulator 9 OS=Zea mays... 0.05 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36950.1 LOC_Os02g36950 Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_23074g0010 No alias Cell number regulator 1 OS=Zea mays... 0.06 OrthoFinder output from all 47 species
MA_79837g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g22340.1 No alias Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g19822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017588 No alias not classified & original description: CDS=1-600 0.02 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc04g007900.3.1 PCR2, Solyc04g007900 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc06g066590.4.1 Solyc06g066590 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc12g037950.2.1 Solyc12g037950 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e006266_P001 PCR11, Zm00001e006266 Cell number regulator 7 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 37 135
No external refs found!