1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g117270.1.1

Solyc03g117270.1.1 (Solyc03g117270)


Aliases : Solyc03g117270

Description : F-box protein At5g07610 OS=Arabidopsis thaliana (sp|q9fls0|fb253_arath : 132.0)


Gene families : OG0015185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015185_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117270.1.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01017506001 No alias F-box protein At5g07610 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g41910.1 LOC_Os02g41910 F-box protein At5g07610 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 50 86
No external refs found!