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  5. Solyc03g112260.2.1

Solyc03g112260.2.1 (Solyc03g112260)


Aliases : Solyc03g112260

Description : metabolite transporter (DTX)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g112260.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00187420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder output from all 47 species
AMTR_s00059p00169290 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
AT2G04090 No alias MATE efflux family protein 0.04 OrthoFinder output from all 47 species
AT5G38030 No alias MATE efflux family protein 0.01 OrthoFinder output from all 47 species
Ala_g27946 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37089 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03090 No alias metabolite transporter *(DTX) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene01144.t1 Aspi01Gene01144 metabolite transporter *(DTX) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01145.t2 Aspi01Gene01145 metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10365.t1 Aspi01Gene10365 metabolite transporter *(DTX) & original description: none 0.01 OrthoFinder output from all 47 species
Cre10.g445850 No alias Solute transport.carrier-mediated transport.MOP... 0.01 OrthoFinder output from all 47 species
Ehy_g10396 No alias metabolite transporter *(DTX) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01029136001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
Gb_04739 No alias metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Gb_10399 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Gb_31018 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Gb_40010 No alias metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
LOC_Os03g42830.1 LOC_Os03g42830 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
LOC_Os06g29994.1 LOC_Os06g29994 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Len_g48729 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09630 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
MA_110289g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_23645g0010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_407755g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007255 No alias metabolite transporter *(DTX) & original description:... 0.01 OrthoFinder output from all 47 species
Smo407976 No alias Solute transport.carrier-mediated transport.MOP... 0.06 OrthoFinder output from all 47 species
Solyc01g109320.4.1 Solyc01g109320 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc03g118970.3.1 Solyc03g118970 metabolite transporter (DTX) 0.01 OrthoFinder output from all 47 species
Solyc07g008410.4.1 Solyc07g008410 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Solyc12g006360.3.1 TT12, ATTT12,... metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Spa_g25659 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32145 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 268 437
IPR002528 MATE_fam 47 206
No external refs found!