1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g097740.1.1

Solyc03g097740.1.1 (Solyc03g097740)


Aliases : Solyc03g097740

Description : U-box domain-containing protein 4 OS=Arabidopsis thaliana (sp|o22193|pub4_arath : 80.5)


Gene families : OG0001298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001298_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g097740.1.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
Adi_g021869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027519001 No alias U-box domain-containing protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_11306 No alias Protein ARABIDILLO 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_37022 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g46995.1 LOC_Os06g46995 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g37350.1 LOC_Os07g37350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g05030.1 LOC_Os09g05030 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os10g37850.1 LOC_Os10g37850 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g23321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g12880.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e002145_P001 Zm00001e002145 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009429_P002 Zm00001e009429 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013053_P001 Zm00001e013053 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 174 213
No external refs found!