Solyc03g083440.4.1 (GLT1, Solyc03g083440)

Aliases : GLT1, Solyc03g083440

Description : NADH-dependent glutamate synthase

Gene families : OG0000707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000707_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g083440.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00249200	GLT1,...	Nutrient uptake.nitrogen assimilation.ammonium...	0.03	OrthoFinder output from all 47 species
AT5G53460	GLT1	NADH-dependent glutamate synthase 1	0.03	OrthoFinder output from all 47 species
Aev_g18696	GLT1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.03	OrthoFinder output from all 47 species
Als_g58695	GLT1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.04	OrthoFinder output from all 47 species
Cre13.g592200	GLT1	Nutrient uptake.nitrogen assimilation.ammonium...	0.01	OrthoFinder output from all 47 species
Ehy_g05115	GLT1	EC_1.4 oxidoreductase acting on CH-NH2 group of donor &...	0.02	OrthoFinder output from all 47 species
MA_10433005g0010	GLU1, FD-GOGAT,...	Ferredoxin-dependent glutamate synthase, chloroplastic...	0.03	OrthoFinder output from all 47 species
MA_9577349g0010	GLT1	Glutamate synthase 1 [NADH], chloroplastic...	0.04	OrthoFinder output from all 47 species
Sam_g39577	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006536	glutamate metabolic process	None	Extended
BP	GO:0006537	glutamate biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009064	glutamine family amino acid metabolic process	None	Extended
BP	GO:0009084	glutamine family amino acid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015930	glutamate synthase activity	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	Interproscan
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0043650	dicarboxylic acid biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR028261	DPD_II	1740	1850
IPR006982	Glu_synth_centr_N	611	899
IPR017932	GATase_2_dom	134	561
IPR002489	Glu_synth_asu_C	1418	1604
IPR002932	Glu_synthdom	966	1335
IPR023753	FAD/NAD-binding_dom	1864	2189

External Links

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Solyc03g083440.4.1 (GLT1, Solyc03g083440)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation