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  5. Solyc03g025390.3.1

Solyc03g025390.3.1 (Solyc03g025390)


Aliases : Solyc03g025390

Description : component Tic32 of inner envelope TIC translocation system


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g025390.3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Adi_g043564 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0265.g060946 No alias not classified & original description: CDS=567-1532 0.01 OrthoFinder output from all 47 species
Cba_g34321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G063200.1 Ceric.11G063200 not classified & original description: pacid=50595578... 0.03 OrthoFinder output from all 47 species
Cre02.g113652 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Dac_g23691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019741001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.05 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
LOC_Os04g22380.1 LOC_Os04g22380 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Lfl_g38370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40152 No alias component *(Tic32) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Pir_g14451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012608 No alias not classified & original description: CDS=342-1457 0.04 OrthoFinder output from all 47 species
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc10g086390.2.1 Solyc10g086390 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Spa_g01710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016494_P001 Zm00001e016494 Short-chain dehydrogenase TIC 32, chloroplastic... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 31 177
No external refs found!