Solyc03g019750.3.1 (RGP3, RGP, Solyc03g019750)


Aliases : RGP3, RGP, Solyc03g019750

Description : UDP-L-arabinose mutase


Gene families : OG0001238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g019750.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G08900 RGP3, RGP reversibly glycosylated polypeptide 3 0.05 OrthoFinder output from all 47 species
AT5G50750 RGP4 reversibly glycosylated polypeptide 4 0.05 OrthoFinder output from all 47 species
Cba_g01842 RGP3, RGP UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008133001 RGP3, RGP Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
GSVIVT01036557001 RGP3, RGP Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Gb_31191 RGP3, RGP UDP-L-arabinose mutase 0.05 OrthoFinder output from all 47 species
Len_g04223 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05869 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34861 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
MA_162652g0010 RGP3, RGP UDP-L-arabinose mutase 0.04 OrthoFinder output from all 47 species
Ore_g28090 ATRGP1, RGP1 UDP-L-arabinose mutase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g012070.3.1 ATRGP1, RGP1,... UDP-L-arabinose mutase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR037595 RGP_fam 6 339
No external refs found!