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  5. Solyc03g006620.3.1

Solyc03g006620.3.1 (Solyc03g006620)


Aliases : Solyc03g006620

Description : no hits & (original description: none)


Gene families : OG0002286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g006620.3.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00267520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00032490 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G11210 No alias Protein of unknown function (DUF761) 0.04 OrthoFinder output from all 47 species
AT1G61260 No alias Protein of unknown function (DUF761) 0.08 OrthoFinder output from all 47 species
AT4G04990 No alias Protein of unknown function (DUF761) 0.04 OrthoFinder output from all 47 species
AT5G54300 No alias Protein of unknown function (DUF761) 0.02 OrthoFinder output from all 47 species
Ala_g09053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020312 No alias not classified & original description: CDS=1-1332 0.03 OrthoFinder output from all 47 species
Cba_g44165 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G026200.1 Ceric.39G026200 not classified & original description: pacid=50582435... 0.03 OrthoFinder output from all 47 species
Dcu_g15336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01006712001 No alias No description available 0.08 OrthoFinder output from all 47 species
MA_454449g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g07369 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g21409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405347 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g54820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025520 DUF4408 40 71
IPR008480 DUF761_pln 305 340
No external refs found!