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  5. Solyc02g087840.3.1

Solyc02g087840.3.1 (ATHB3, HB-3, ATHB-3,...)


Aliases : ATHB3, HB-3, ATHB-3, HAT7, Solyc02g087840

Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087840.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G26960 AtHB23, HB23 homeobox protein 23 0.03 OrthoFinder output from all 47 species
AT3G01220 ATHB20, HB20 homeobox protein 20 0.05 OrthoFinder output from all 47 species
AT3G01470 ATHB1, ATHB-1,... homeobox 1 0.06 OrthoFinder output from all 47 species
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.04 OrthoFinder output from all 47 species
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.04 OrthoFinder output from all 47 species
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.04 OrthoFinder output from all 47 species
AT5G53980 ATHB52, HB52 homeobox protein 52 0.04 OrthoFinder output from all 47 species
Adi_g020723 HB51, ATHB51, LMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054811 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g054904 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g058933 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g082075 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g116604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04744 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Aev_g10824 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g21465 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ala_g31747 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g04970 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g23746 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Als_g32222 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g37063 ATHB22, HB22 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g03183 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g31187 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05113.t1 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Aspi01Gene07957.t1 ATHB13, Aspi01Gene07957 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31735.t2 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39416.t1 ATHB5, ATHB-5,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48842.t1 ATHB13, Aspi01Gene48842 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68244.t1 ATHB3, HB-3,... regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Azfi_s3184.g114979 No alias not classified & original description: CDS=620-892 0.03 OrthoFinder output from all 47 species
Cba_g68678 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Dac_g34453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11561 ATHB21, HB21, HB-2 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g17794 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g23915 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020033001 ATHB13 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_20878 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os02g43330.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49700.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os03g07450.1 ATHB13, LOC_Os03g07450 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08960.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os03g10210.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
LOC_Os04g45810.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
LOC_Os08g32080.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.07 OrthoFinder output from all 47 species
LOC_Os08g32085.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.07 OrthoFinder output from all 47 species
LOC_Os09g35910.1 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.07 OrthoFinder output from all 47 species
LOC_Os10g23090.1 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
Len_g04607 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Len_g10023 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Len_g45930 ATHB40, HB40, HB-5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g51073 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
MA_10428916g0010 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
MA_132936g0010 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
MA_19453g0050 ATHB1, ATHB-1,... Homeobox-leucine zipper protein HAT5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_441783g0010 AtHB23, HB23 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g03143 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07680 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g13843 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g29745 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g03346 HB6, ATHB6 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Ore_g03347 No alias regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Ore_g41934 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g28211 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g06112 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g07961 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Pnu_g15485 ATHB13 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Ppi_g31173 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g067410.2.1 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.06 OrthoFinder output from all 47 species
Solyc03g034130.4.1 ATHB40, HB40,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Solyc04g074700.4.1 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Solyc09g008810.3.1 HB51, ATHB51,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Solyc10g150101.1.1 ATHB52, HB52,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e002803_P001 ATHB16, HB16,... transcription factor (HD-ZIP I/II) 0.07 OrthoFinder output from all 47 species
Zm00001e004824_P001 ATHB3, HB-3,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e007381_P001 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e010218_P001 HB-7, ATHB-7,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e015274_P001 ATHB5, ATHB-5,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e015717_P003 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e022379_P002 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e023458_P003 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species
Zm00001e034785_P001 HB-12, ATHB-12,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Zm00001e038901_P001 ATHB13, Zm00001e038901 transcription factor (HD-ZIP I/II) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 95 148
IPR003106 Leu_zip_homeo 150 190
No external refs found!