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  5. Solyc02g071980.3.1

Solyc02g071980.3.1 (Solyc02g071980)


Aliases : Solyc02g071980

Description : no hits & (original description: none)


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g071980.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G29800 No alias RING/FYVE/PHD-type zinc finger family protein 0.06 OrthoFinder output from all 47 species
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
Adi_g056766 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Aop_g03524 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Azfi_s2862.g113502 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ceric.37G042800.1 Ceric.37G042800 auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.07 OrthoFinder output from all 47 species
Dac_g00888 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Dde_g02242 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ehy_g18591 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
GSVIVT01014153001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01015009001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g03070 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Mp3g11370.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15854 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ore_g05728 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ore_g09436 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.04 OrthoFinder output from all 47 species
Pir_g14649 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Sam_g06477 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Spa_g04203 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g17958 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.06 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004594 pantothenate kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 560 684
IPR000306 Znf_FYVE 378 443
No external refs found!