- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc02g068680
Description : no hits & (original description: none)
Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc02g068680.1.1 | |
| Cluster | HCCA: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00098310 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AT2G17740 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G27660 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G37805 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42060 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G44370 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G44380 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G43520 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057572 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g19331 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13834 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14055.t1 | Aspi01Gene14055 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene29127.t1 | Aspi01Gene29127 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene59532.t1 | Aspi01Gene59532 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0408.g068454 | No alias | not classified & original description: CDS=95-1408 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G064000.1 | Ceric.18G064000 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.33G006500.1 | Ceric.33G006500 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g31920 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g01391 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g02288 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g05770 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01034093001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g68460.1 | LOC_Os01g68460 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g41890.1 | LOC_Os07g41890 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g41910.1 | LOC_Os07g41910 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g41920.1 | LOC_Os07g41920 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g42040.1 | LOC_Os07g42040 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g31250.1 | LOC_Os08g31250 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g31280.1 | LOC_Os08g31280 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g09590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436357g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| MA_251691g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g19710 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g44989 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g01055 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10648 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g43990 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g60934 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015605 | No alias | not classified & original description: CDS=1-1329 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0128.g021903 | No alias | not classified & original description: CDS=1921-2982 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g073800.2.1 | Solyc01g073800 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g073810.2.1 | Solyc01g073810 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g073860.3.1 | Solyc01g073860 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g011260.2.1 | Solyc09g011260 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g011270.4.1 | Solyc09g011270 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21651 | AtAIRP1, AIRP1 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021370_P001 | Zm00001e021370 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e038822_P001 | Zm00001e038822 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006887 | exocytosis | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031012 | extracellular matrix | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0032940 | secretion by cell | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046903 | secretion | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| MF | GO:0050664 | oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor | IEP | HCCA |
| BP | GO:0051259 | protein complex oligomerization | IEP | HCCA |
| BP | GO:0051260 | protein homooligomerization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| BP | GO:0140352 | export from cell | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |