1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g067820.4.1

Solyc02g067820.4.1 (Solyc02g067820)


Aliases : Solyc02g067820

Description : component GAA1 of GPI transamidase complex


Gene families : OG0005336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005336_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067820.4.1

Target Alias Description ECC score Gene Family Method Actions
AT5G19130 No alias GPI transamidase component family protein / Gaa1-like... 0.04 OrthoFinder output from all 47 species
Adi_g059727 No alias component *(GAA1) of GPI transamidase complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g02297 No alias component *(GAA1) of GPI transamidase complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G049800.1 Ceric.01G049800 component *(GAA1) of GPI transamidase complex & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01032407001 No alias Protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g48980.1 LOC_Os01g48980 component GAA1 of GPI transamidase complex 0.03 OrthoFinder output from all 47 species
MA_55048g0010 No alias component GAA1 of GPI transamidase complex 0.04 OrthoFinder output from all 47 species
Nbi_g23125 No alias component *(GAA1) of GPI transamidase complex & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017025 No alias component *(GAA1) of GPI transamidase complex & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042765 GPI-anchor transamidase complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR007246 Gaa1 138 668
No external refs found!