Solyc02g061770.4.1 (HCHIB, B-CHI,...)

Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B, Solyc02g061770

Description : Basic endochitinase (Fragment) OS=Solanum lycopersicum (sp|q05537|chid_sollc : 443.0)

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g061770.4.1
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00243300	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.03	OrthoFinder output from all 47 species
AMTR_s00001p00243570	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum	0.02	OrthoFinder output from all 47 species
AMTR_s00001p00243680	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
AMTR_s00001p00243780	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.03	OrthoFinder output from all 47 species
AMTR_s00066p00199730	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT2G43610	No alias	Chitinase family protein	0.04	OrthoFinder output from all 47 species
Aev_g37269	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g30545	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene32081.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32099.t1	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32152.t1	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65471.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000738	ATEP3, EP3,...	not classified & original description: CDS=1-1110	0.02	OrthoFinder output from all 47 species
Dcu_g19889	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g25280	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04363	HCHIB, B-CHI,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ehy_g21647	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01038108001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038111001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038113001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038114001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01038116001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Gb_07464	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Gb_20765	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os02g39330.1	ATEP3, EP3,...	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os04g41620.1	ATEP3, EP3,...	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os04g41680.1	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
LOC_Os05g04690.1	LOC_Os05g04690	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.05	OrthoFinder output from all 47 species
LOC_Os06g51050.1	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os06g51060.1	HCHIB, B-CHI,...	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os10g39680.1	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Len_g56980	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g25481	ATEP3, EP3,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_102538g0010	No alias	Endochitinase A OS=Zea mays (sp\|p29022\|chia_maize : 100.0)	0.02	OrthoFinder output from all 47 species
MA_10313114g0010	HCHIB, B-CHI,...	Endochitinase B OS=Nicotiana tabacum...	0.02	OrthoFinder output from all 47 species
MA_10435326g0020	ATEP3, EP3,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_530083g0010	HCHIB, B-CHI,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_741127g0010	No alias	Endochitinase At2g43610 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Mp2g21810.1	HCHIB, B-CHI,...	Chitinase 1 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Mp2g24410.1	HCHIB, B-CHI,...	Endochitinase CH25 OS=Brassica napus...	0.02	OrthoFinder output from all 47 species
Nbi_g23741	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42172	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g01615	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008764	ATEP3, EP3,...	not classified & original description: CDS=1-579	0.03	OrthoFinder output from all 47 species
Smo446851	HCHIB, B-CHI,...	Endochitinase A2 OS=Pisum sativum	0.02	OrthoFinder output from all 47 species
Solyc02g082920.4.1	HCHIB, B-CHI,...	Acidic 26 kDa endochitinase OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Solyc02g082930.3.1	HCHIB, B-CHI,...	Acidic 27 kDa endochitinase OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Solyc06g053380.3.1	ATEP3, EP3,...	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Solyc07g009510.1.1	HEL, PR4, PR-4,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc10g055810.2.1	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Zm00001e026826_P001	HCHIB, B-CHI,...	Chitinase 2 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
Zm00001e027534_P001	Zm00001e027534	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0010274	hydrotropism	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	25	256

External Links

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Solyc02g061770.4.1 (HCHIB, B-CHI,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation