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  5. Solyc02g032970.4.1

Solyc02g032970.4.1 (emb2458, Solyc02g032970)


Aliases : emb2458, Solyc02g032970

Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana (sp|f4j3n2|ftsi5_arath : 315.0)


Gene families : OG0007060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g032970.4.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Aop_g58398 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.05 OrthoFinder output from all 47 species
GSVIVT01021791001 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.04 OrthoFinder output from all 47 species
Len_g01924 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
MA_10435946g0010 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
MA_9758g0010 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
Mp6g10290.1 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.02 OrthoFinder output from all 47 species
Sam_g14588 No alias component *(FtsHi) of protein translocation ATPase motor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 11 185
No external refs found!