1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g032720.3.1

Solyc02g032720.3.1 (AFP3, Solyc02g032720)


Aliases : AFP3, Solyc02g032720

Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g032720.3.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Dac_g28784 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g033020.1.1 Solyc02g033020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc02g066855.1.1 AFP3, Solyc02g066855 transcriptional co-repressor (AFP/NINJA) 0.11 OrthoFinder output from all 47 species
Solyc02g150115.1.1 AFP2, Solyc02g150115 transcriptional co-repressor (AFP/NINJA) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR032308 TDBD 305 365
No external refs found!