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Aliases : ATROPGEF1, ROPGEF1, Solyc01g111930
Description : PRONE-type RopGEF guanine nucleotide exchange factor
Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00182400 | ATROPGEF1,... | Multi-process regulation.Rop GTPase regulatory... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00009p00249740 | ROPGEF7,... | Multi-process regulation.Rop GTPase regulatory... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G45890 | ATROPGEF4, RHS11, ROPGEF4 | RHO guanyl-nucleotide exchange factor 4 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G38430 | ATROPGEF1, ROPGEF1 | rho guanyl-nucleotide exchange factor 1 | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g011896 | ROPGEF7, ATROPGEF7 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024149 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13296 | ROPGEF7, ATROPGEF7 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10440 | ATROPGEF5, ROPGEF5 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62805 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g35625 | ROPGEF7, ATROPGEF7 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene54790.t1 | ATROPGEF1,... | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0084.g038941 | ROPGEF7, ATROPGEF7 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12882 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.08G038100.1 | ATROPGEF1,... | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G021400.1 | ROPGEF7,... | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z028300.1 | ROPGEF7,... | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g00928 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g27497 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04886 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15220 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023897001 | ATROPGEF1, ROPGEF1 | Multi-process regulation.Rop GTPase regulatory... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01036908001 | ROPGEF14, ATROPGEF14 | Multi-process regulation.Rop GTPase regulatory... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os02g47420.3 | ROPGEF14,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g37270.1 | ATROPGEF1,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.11 | OrthoFinder output from all 47 species | |
| Len_g04773 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29856 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_66695g0010 | ROPGEF7, ATROPGEF7 | PRONE-type RopGEF guanine nucleotide exchange factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g06550.1 | ATROPGEF1, ROPGEF1 | PRONE-type RopGEF guanine nucleotide exchange factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g08115 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g10291 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02185 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15875 | No alias | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40346 | No alias | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo43109 | ROPGEF7, ATROPGEF7 | Multi-process regulation.Rop GTPase regulatory... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g082110.4.1 | ATROPGEF1,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g00469 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08979 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12272 | ROPGEF7, ATROPGEF7 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g01194 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05160 | ATROPGEF1, ROPGEF1 | RopGEF guanine nucleotide exchange factor *(PRONE) &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010284_P002 | ATROPGEF1,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e015569_P002 | ROPGEF14,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034952_P003 | ATROPGEF1,... | PRONE-type RopGEF guanine nucleotide exchange factor | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008037 | cell recognition | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
| BP | GO:0009116 | nucleoside metabolic process | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0048544 | recognition of pollen | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005512 | PRONE_dom | 99 | 472 |
| No external refs found! |