1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g110510.3.1

Solyc01g110510.3.1 (Solyc01g110510)


Aliases : Solyc01g110510

Description : no hits & (original description: none)


Gene families : OG0003248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g110510.3.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00192410 evm_27.TU.AmTr_v1... Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g05971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20890 No alias Clathrin interactor EPSIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433514g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc01g110500.3.1 Solyc01g110500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR013809 ENTH 32 155
No external refs found!