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  5. Solyc01g108850.2.1

Solyc01g108850.2.1 (TMK1, Solyc01g108850)


Aliases : TMK1, Solyc01g108850

Description : Receptor protein kinase TMK1 OS=Arabidopsis thaliana (sp|p43298|tmk1_arath : 448.0)


Gene families : OG0000691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108850.2.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g13542 TMK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30266.t1 Aspi01Gene30266 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033967 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035786 No alias EC_2.7 transferase transferring phosphorus-containing... 0.01 OrthoFinder output from all 47 species
Cba_g12753 TMK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Cba_g26716 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ceric.04G074100.1 Ceric.04G074100 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Dac_g12114 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Dac_g35089 TMK1 EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os03g50810.1 TMK1, LOC_Os03g50810 protein kinase (LRR-IX) 0.02 OrthoFinder output from all 47 species
Mp3g08670.1 TMK1 protein kinase (LRR-IX) 0.02 OrthoFinder output from all 47 species
Nbi_g13277 TMK1 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ore_g19935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 187 207
IPR013210 LRR_N_plant-typ 26 61
IPR013210 LRR_N_plant-typ 327 362
No external refs found!