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  5. Solyc01g098090.3.1

Solyc01g098090.3.1 (LRS1, Solyc01g098090)


Aliases : LRS1, Solyc01g098090

Description : Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii (sp|q3y8l7|daw1_chlre : 84.3)


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g098090.3.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Adi_g059134 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g087408 LRS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58023 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cre13.g583250 LRS1 No description available 0.02 OrthoFinder output from all 47 species
Dac_g09416 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Dcu_g03095 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01021896001 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
Gb_30748 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.04 OrthoFinder output from all 47 species
LOC_Os12g06810.1 LRS1, LOC_Os12g06810 Dynein assembly factor with WDR repeat domains 1... 0.07 OrthoFinder output from all 47 species
MA_18695g0010 LRS1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_555156g0010 LRS1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g09811 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Pir_g09739 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018560 LRS1 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo139346 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.05 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021772 WDR48/Bun107 615 685
IPR001680 WD40_repeat 79 115
IPR001680 WD40_repeat 121 159
IPR001680 WD40_repeat 255 291
IPR001680 WD40_repeat 218 249
No external refs found!