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Aliases : ATHEXP BETA 1.4, ATEXPB2, EXPB2, Solyc01g090820
Description : Putative expansin-B14 OS=Oryza sativa subsp. japonica (sp|q6h677|exb14_orysj : 231.0)
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g090820.2.1 | |
| Cluster | HCCA: Cluster_44 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G28950 | EXPA6, ATEXP6,... | expansin A6 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g010993 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g08029 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58043.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G087800.1 | ATEXPA10,... | alpha-class expansin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G039600.1 | EXP15, ATEXPA15,... | alpha-class expansin & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g10261 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15384 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15610 | ATEXPA10,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16993 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16994 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g40575 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06200 | EXPA8, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11792 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07439 | EXPA8, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10701 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g14650.1 | ATEXPA1, EXP1,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g19570.1 | LOC_Os05g19570 | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g50400.1 | ATEXPA11, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g40710.1 | ATHEXP BETA 1.4,... | Expansin-B2 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g15335 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10429288g0010 | EXPA16, ATHEXP... | alpha-class expansin | 0.01 | OrthoFinder output from all 47 species | |
| MA_2687768g0010 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g115270.3.1 | ATHEXP ALPHA ... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g063210.3.1 | ATHEXP ALPHA... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041520_P001 | ATHEXP BETA 1.4,... | Expansin-B18 OS=Oryza sativa subsp. japonica... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0009605 | response to external stimulus | IEP | HCCA |
| BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
| BP | GO:0009620 | response to fungus | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050832 | defense response to fungus | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0051707 | response to other organism | IEP | HCCA |
| BP | GO:0098542 | defense response to other organism | IEP | HCCA |
| No external refs found! |