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  5. Solyc01g088010.1.1

Solyc01g088010.1.1 (Solyc01g088010)


Aliases : Solyc01g088010

Description : no hits & (original description: none)


Gene families : OG0001159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001159_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g088010.1.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G28420 No alias Lactoylglutathione lyase / glyoxalase I family protein 0.25 OrthoFinder output from all 47 species
Aev_g09453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71508.t1 Aspi01Gene71508 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001440001 No alias No description available 0.25 OrthoFinder output from all 47 species
GSVIVT01015508001 No alias No description available 0.01 OrthoFinder output from all 47 species
Gb_18731 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g07940.1 LOC_Os05g07940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g46360.1 LOC_Os07g46360 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
MA_15220g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g33782 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014788 No alias not classified & original description: CDS=1-498 0.02 OrthoFinder output from all 47 species
Sam_g11459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035745_P001 Zm00001e035745 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
CC GO:0012511 monolayer-surrounded lipid storage body IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004360 Glyas_Fos-R_dOase_dom 78 200
No external refs found!