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  5. Solyc01g080410.3.1

Solyc01g080410.3.1 (MSRB5, ATMSRB5, Solyc01g080410)


Aliases : MSRB5, ATMSRB5, Solyc01g080410

Description : Peptide methionine sulfoxide reductase B3, chloroplastic OS=Oryza sativa subsp. japonica (sp|q6auk5|msrb3_orysj : 234.0)


Gene families : OG0001255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g080410.3.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT4G04810 MSRB4, ATMSRB4 methionine sulfoxide reductase B4 0.02 OrthoFinder output from all 47 species
AT4G04840 MSRB6, ATMSRB6 methionine sulfoxide reductase B6 0.05 OrthoFinder output from all 47 species
AT4G21830 MSRB7, ATMSRB7 methionine sulfoxide reductase B7 0.04 OrthoFinder output from all 47 species
AT4G21840 MSRB8, ATMSRB8 methionine sulfoxide reductase B8 0.03 OrthoFinder output from all 47 species
Ala_g10453 MSRB1, ATMSRB1 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Als_g37394 MSRB2 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.03 OrthoFinder output from all 47 species
Ceric.14G092600.1 MSRB2, Ceric.14G092600 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.03 OrthoFinder output from all 47 species
Cre14.g615100 MSRB2 Peptide methionine sulfoxide reductase B2, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g03935 MSRB5, ATMSRB5 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Mp7g06110.1 MSRB1, ATMSRB1 Peptide methionine sulfoxide reductase B1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g43181 MSRB1, ATMSRB1 methionine R-enantiomer sulfoxide reductase *(MsrB) &... 0.02 OrthoFinder output from all 47 species
Smo170312 MSRB2 Peptide methionine sulfoxide reductase B5 OS=Oryza... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002579 Met_Sox_Rdtase_MsrB_dom 9 127
No external refs found!