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  5. Solyc01g079300.4.1

Solyc01g079300.4.1 (AtSTS, STS, Solyc01g079300)


Aliases : AtSTS, STS, Solyc01g079300

Description : stachyose synthase


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g079300.4.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 AtSTS, STS,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00147100 SIP1,... Galactinol--sucrose galactosyltransferase OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00129230 AtSIP1, SIP1,... Probable galactinol--sucrose galactosyltransferase 1... 0.02 OrthoFinder output from all 47 species
Aev_g19198 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g38710.1 AtSIP1, SIP1,... galactinol-sucrose galactosyltransferase 0.02 OrthoFinder output from all 47 species
Lfl_g09706 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_45536g0010 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
Msp_g16033 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22941 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 24 852
No external refs found!