- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Solyc01g073860
Description : no hits & (original description: none)
Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc01g073860.3.1 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00263580 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00263620 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00098310 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00059p00175720 | evm_27.TU.AmTr_v1... | No description available | 0.07 | OrthoFinder output from all 47 species | |
| AT2G17740 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.17 | OrthoFinder output from all 47 species | |
| AT2G27660 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.11 | OrthoFinder output from all 47 species | |
| AT2G37805 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT2G37820 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42060 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G44370 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G44380 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT2G44390 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G44400 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G40590 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G43520 | No alias | Cysteine/Histidine-rich C1 domain family protein | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene14056.t1 | RHB1A, Aspi01Gene14056 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene29127.t1 | Aspi01Gene29127 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene59532.t1 | Aspi01Gene59532 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0408.g068454 | No alias | not classified & original description: CDS=95-1408 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s2885.g113560 | No alias | not classified & original description: CDS=689-1675 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.16G051800.1 | Ceric.16G051800 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G064000.1 | Ceric.18G064000 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.33G006500.1 | Ceric.33G006500 | E3 ubiquitin ligase *(AIRP1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g04165 | AtAIRP1, AIRP1 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g31920 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36226 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01034093001 | No alias | No description available | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g68460.1 | LOC_Os01g68460 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g41890.1 | LOC_Os07g41890 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g41910.1 | LOC_Os07g41910 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g41920.1 | LOC_Os07g41920 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g41980.1 | LOC_Os07g41980 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g42040.1 | LOC_Os07g42040 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g42070.1 | LOC_Os07g42070 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g31250.1 | LOC_Os08g31250 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_18827g0020 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_251691g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_4432g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g44989 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004401 | No alias | not classified & original description: CDS=1-1194 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0063.g015605 | No alias | not classified & original description: CDS=1-1329 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g073780.2.1 | Solyc01g073780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g073890.3.1 | Solyc01g073890 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc02g068680.1.1 | Solyc02g068680 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g072460.1.1 | Solyc06g072460 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc08g014370.1.1 | Solyc08g014370 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g011270.4.1 | Solyc09g011270 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc12g038680.1.1 | Solyc12g038680 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g09771 | No alias | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g21651 | AtAIRP1, AIRP1 | E3 ubiquitin ligase *(AIRP1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g21972 | No alias | E3 ubiquiTin ligase *(AIRP1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |