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  5. Solyc01g017600.3.1

Solyc01g017600.3.1 (Solyc01g017600)


Aliases : Solyc01g017600

Description : no hits & (original description: none)


Gene families : OG0000560 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g017600.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT5G19870 No alias Family of unknown function (DUF716) 0.04 OrthoFinder output from all 47 species
Als_g16231 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene60656.t1 Aspi01Gene60656 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G028100.1 Ceric.27G028100 not classified & original description: pacid=50605886... 0.03 OrthoFinder output from all 47 species
Gb_07540 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g36040.1 LOC_Os08g36040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_135096g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g090560.2.1 Solyc09g090560 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR006904 DUF716 122 258
No external refs found!