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  5. Solyc01g014910.2.1

Solyc01g014910.2.1 (ZOU, RGE1, Solyc01g014910)


Aliases : ZOU, RGE1, Solyc01g014910

Description : transcription factor (bHLH)


Gene families : OG0009038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g014910.2.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G49770 ZOU, RGE1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
GSVIVT01031718001 ZOU, RGE1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34320.1 ZOU, RGE1, LOC_Os02g34320 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os04g35000.1 LOC_Os04g35000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp4g19650.1 ZOU, RGE1 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc01g014960.1.1 ZOU, RGE1, Solyc01g014960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g107950.2.1 ZOU, RGE1, Solyc01g107950 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e008118_P002 ZOU, RGE1, Zm00001e008118 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 105 147
No external refs found!