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  5. Solyc01g008230.4.1

Solyc01g008230.4.1 (Solyc01g008230)


Aliases : Solyc01g008230

Description : transcription factor (TCP). CHE circadian clock repression factor


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g008230.4.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g01440 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56690.t1 Aspi01Gene56690 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g58006 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06948 AT-TCP20, TCP20,... circadian clock activation factor *(TCP20) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13050 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27632 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015821_P001 Zm00001e015821 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e040592_P001 Zm00001e040592 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 37 125
No external refs found!