Solyc00g500322.1.1 (ATPF, Solyc00g500322)

Aliases : ATPF, Solyc00g500322

Description : subunit b of membrane CF0 subcomplex of ATP synthase complex

Gene families : OG0008773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008773_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc00g500322.1.1
Cluster	HCCA: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
ATCG00130	ATPF	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	0.42	OrthoFinder output from all 47 species
Aev_g16148	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.29	OrthoFinder output from all 47 species
Aob_g35727	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.13	OrthoFinder output from all 47 species
Azfi_s0009.g011763	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Azfi_s0026.g023369	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
Ceric.01G056800.1	ATPF, Ceric.01G056800	subunit b of membrane CF0 subcomplex of ATP synthase...	0.11	OrthoFinder output from all 47 species
Ceric.02G012400.1	ATPF, Ceric.02G012400	subunit b of membrane CF0 subcomplex of ATP synthase...	0.11	OrthoFinder output from all 47 species
Ceric.11G075700.1	Ceric.11G075700	subunit b of membrane CF0 subcomplex of ATP synthase...	0.12	OrthoFinder output from all 47 species
Ceric.13G052600.1	ATPF, Ceric.13G052600	subunit b of membrane CF0 subcomplex of ATP synthase...	0.07	OrthoFinder output from all 47 species
Ceric.14G033500.1	Ceric.14G033500	subunit b of membrane CF0 subcomplex of ATP synthase...	0.12	OrthoFinder output from all 47 species
Ceric.19G010600.1	ATPF, Ceric.19G010600	subunit b of membrane CF0 subcomplex of ATP synthase...	0.18	OrthoFinder output from all 47 species
Ceric.29G005200.1	ATPF, Ceric.29G005200	subunit b of membrane CF0 subcomplex of ATP synthase...	0.31	OrthoFinder output from all 47 species
Ceric.38G010500.1	Ceric.38G010500	subunit b of membrane CF0 subcomplex of ATP synthase...	0.29	OrthoFinder output from all 47 species
Dcu_g12660	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.09	OrthoFinder output from all 47 species
LOC_Os04g16748.1	ATPF, LOC_Os04g16748	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.44	OrthoFinder output from all 47 species
LOC_Os10g21238.1	ATPF, LOC_Os10g21238	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.44	OrthoFinder output from all 47 species
LOC_Os10g38272.1	ATPF, LOC_Os10g38272	subunit b of membrane CF0 subcomplex of ATP synthase complex	0.44	OrthoFinder output from all 47 species
Nbi_g01702	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.14	OrthoFinder output from all 47 species
Pir_g18656	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.2	OrthoFinder output from all 47 species
Pnu_g27868	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028297	No alias	not classified & original description: CDS=1-537	0.1	OrthoFinder output from all 47 species
Sam_g33436	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.06	OrthoFinder output from all 47 species
Spa_g18388	No alias	subunit b of membrane CF0 subcomplex of ATP synthase...	0.05	OrthoFinder output from all 47 species
Tin_g20608	ATPF	subunit b of membrane CF0 subcomplex of ATP synthase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	IEA	Interproscan
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEA	Interproscan
BP	GO:0046034	ATP metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009539	photosystem II reaction center	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002146	ATP_synth_b/b'su_bac/chlpt	34	141

External Links

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Solyc00g500322.1.1 (ATPF, Solyc00g500322)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation