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  5. Smo86140

Smo86140


Description : Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana


Gene families : OG0000517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo86140
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT3G24330 No alias O-Glycosyl hydrolases family 17 protein 0.03 OrthoFinder output from all 47 species
AT4G31140 No alias O-Glycosyl hydrolases family 17 protein 0.02 OrthoFinder output from all 47 species
Aev_g01198 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17226 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g22507 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0213.g058239 No alias EC_3.2 glycosylase & original description: CDS=1-1545 0.03 OrthoFinder output from all 47 species
Cba_g37028 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G051800.1 Ceric.10G051800 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G060300.1 Ceric.15G060300 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g17914 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002584001 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_21213 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g45390.1 LOC_Os03g45390 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57880.1 LOC_Os03g57880 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g07340.1 LOC_Os07g07340 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g36940.1 LOC_Os11g36940 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g19157 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g16260.1 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g09175 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14474 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17398 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25170 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13406 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28257 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo32959 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc07g017730.3.1 Solyc07g017730 Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g52151 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011243_P001 Zm00001e011243 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e013629_P001 Zm00001e013629 Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 29 346
No external refs found!