Smo76977


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo76977

Target Alias Description ECC score Gene Family Method Actions
Adi_g036887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103398 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0003.g008139 No alias E3 ubiquitin ligase *(DRR1) & original description: CDS=62-1507 0.03 OrthoFinder output from all 47 species
Cba_g00341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G075100.1 Ceric.20G075100 E3 ubiquitin ligase *(DRR1) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_16413 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g01168 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25526 No alias E3 ubiquitin ligase *(DRR1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g067770.3.1 Solyc08g067770 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc12g006940.2.1 Solyc12g006940 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016704_P001 Zm00001e016704 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009113 purine nucleobase biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0046112 nucleobase biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 338 379
No external refs found!