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  5. Smo74297

Smo74297


Description : RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component


Gene families : OG0006426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo74297

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00258470 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
AT3G55160 No alias unknown protein; EXPRESSED IN: 11 plant structures;... 0.1 OrthoFinder output from all 47 species
Als_g32910 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
Azfi_s0208.g058004 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.04 OrthoFinder output from all 47 species
Cba_g74571 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Ceric.12G034300.1 Ceric.12G034300 component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.05 OrthoFinder output from all 47 species
Cre15.g642050 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Dcu_g13115 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.04 OrthoFinder output from all 47 species
Dde_g12713 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01011388001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.07 OrthoFinder output from all 47 species
Gb_02094 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.05 OrthoFinder output from all 47 species
Gb_02096 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Gb_02097 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.06 OrthoFinder output from all 47 species
LOC_Os08g07290.1 LOC_Os08g07290 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.05 OrthoFinder output from all 47 species
Len_g23489 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
Lfl_g07855 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
MA_177186g0010 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.03 OrthoFinder output from all 47 species
MA_41436g0010 No alias component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
Ore_g33228 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.07 OrthoFinder output from all 47 species
Sam_g18072 No alias component *(TRM732) of TRM7-TRM732/TRM734 tRNA... 0.02 OrthoFinder output from all 47 species
Solyc03g062650.3.1 Solyc03g062650 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.05 OrthoFinder output from all 47 species
Zm00001e040139_P001 Zm00001e040139 component TRM732 of TRM7-TRM732/TRM734 tRNA... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019442 THADA/TRM732_DUF2428 991 1277
No external refs found!