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  5. Smo444108

Smo444108


Description : Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo444108
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00107090 PMI1,... Cytoskeleton.cp-actin-dependent plastid... 0.03 OrthoFinder output from all 47 species
Adi_g105459 No alias actin stability co-factor *(PMIR) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g30343 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20246 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15578 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08736 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17688 No alias actin stability co-factor *(PMIR) & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0059.g034625 No alias actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Cba_g26453 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.32G018400.1 PMI1, Ceric.32G018400 actin stability co-factor *(PMIR) & original... 0.09 OrthoFinder output from all 47 species
Ceric.35G017200.1 Ceric.35G017200 actin stability co-factor *(PMIR) & original... 0.05 OrthoFinder output from all 47 species
Dac_g12279 No alias actin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22530 PMI1 actin stability factor *(PMI1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16960 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24285 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04049 No alias actin stability co-factor *(PMIR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013417001 PMI1 Cytoskeleton.cp-actin-dependent plastid... 0.04 OrthoFinder output from all 47 species
Gb_31963 No alias actin stability factor (PMI1/PMI15). actin stability... 0.04 OrthoFinder output from all 47 species
LOC_Os09g38090.1 PMI1, LOC_Os09g38090 actin stability factor (PMI1/PMI15) 0.04 OrthoFinder output from all 47 species
LOC_Os10g39430.1 PMI1, LOC_Os10g39430 actin stability factor (PMI1/PMI15) 0.03 OrthoFinder output from all 47 species
Len_g31716 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41137 No alias actin stability factor *(PMI1) & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g02431 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12843 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17701 PMI1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427730g0010 PMI1 actin stability factor (PMI1/PMI15). actin stability... 0.05 OrthoFinder output from all 47 species
Mp2g25860.1 No alias actin stability factor (PMI1/PMI15). actin stability... 0.02 OrthoFinder output from all 47 species
Msp_g19859 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22563 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30432 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36313 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12254 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10117 No alias actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53032 No alias actin stability co-factor *(PMIR) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g30544 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28063 No alias acTin stability co-factor *(PMIR) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002231_P001 PMI1, Zm00001e002231 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species
Zm00001e034908_P002 PMI1, Zm00001e034908 actin stability factor (PMI1/PMI15) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 132 279
No external refs found!