Sequence Description Alias PCC hrr Smo107634 Cytoskeleton.cp-actin-dependent plastid movement.KAC accessory motility factor KCA2, KAC2 0.924492991908074 8 Smo97883 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PC-PLA1-type phospholipase A1 0.921703437211367 3 Smo268623 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase RCA 0.9214368967190567 11 Smo153563 Photosynthesis.photorespiration.glycine cleavage system.P-protein glycine dehydrogenase component AtGLDP2, GLDP2 0.9208863925252239 13 Smo145704 0.9184436321843177 10 Smo442777 RNA-binding protein BRN1 OS=Arabidopsis thaliana RBP-DR1, AtRBP-DR1 0.9166828504538795 12 Smo50862 Probable NAD kinase 2, chloroplastic OS=Oryza sativa subsp. japonica 0.9162470928124855 7 Smo184811 Carbohydrate metabolism.trehalose metabolism.trehalose-6-phosphate synthase ATTPS1, TPS1 0.9151400757482433 18 Smo145611 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase GGT2, AOAT2 0.9134654434918682 20 Smo445683 Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase ATFRO6, FRO6 0.9132877229583328 20 Smo155359 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase GLU1, FD-GOGAT, GLS1, GLUS 0.9131957905645122 15 Smo149815 Photosynthesis.photophosphorylation.photosystem II.photoprotection.MPH1 protein 0.9119953666053934 12 Smo174630 Uncharacterized protein At4g15545 OS=Arabidopsis thaliana 0.9107016029468687 13 Smo169778 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase APL2 0.9057951537272507 14 Smo163526 Coronatine-insensitive protein 1 OS=Arabidopsis thaliana COI1 0.9032658686070116 15 Smo82367 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.9014421736011202 21 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase PRK 0.9004177263671022 29 Smo272067 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase ATCCD1, CCD1, NCED1, ATNCED1 0.8996955797252209 18 Smo448213 0.8971164107216383 29 Smo270825 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase GAPA-2 0.8970588019138799 22 Smo96850 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.8943550640680665 21 Smo137778 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.core components.RpoA core component RPOA 0.8927153153150202 22 Smo137886 Probable maturase K OS=Selaginella uncinata 0.8925949755641107 23 Smo62145 Solute transport.carrier-mediated transport.MFS superfamily.FPN iron-regulated metal cation transporter 0.8919739750617709 24 Smo159420 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein ZKT 0.8873116455129343 26 Smo60775 Solute transport.primary active transport.P-type ATPase superfamily.P1 family.HMA P1B-type heavy metal cation-transporting ATPase 0.8872955771543143 26 Smo439234 Protein modification.peptide maturation.plastid.AraSP plastidial inner envelope protease ARASP 0.884195664989845 27 Smo105991 Carbohydrate metabolism.trehalose metabolism.trehalose-6-phosphate phosphatase ATTPPB, TPPB 0.8830148639818719 28 Smo79425 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase 0.8828003531057911 50 Smo166088 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC PGR1, PETC 0.8817177842737077 33 Smo90782 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana 0.8800584404675036 31 Smo166238 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein LPA3 0.8798675215940353 52 Smo431963 0.8784121153784737 33 Smo408814 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED25 component PFT1 0.8769215443644995 34 Smo448933 0.8752627277544954 35 Smo76749 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase STN7 0.8744915566418805 69 Smo107618 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease CRB, HIP1.3, CSP41B 0.8737176048051788 37 Smo99030 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCC transporter MRP6, ATMRP6, ABCC8 0.8724412550214589 38 Smo144086 Phytohormones.abscisic acid.perception and signalling.membrane-localized receptors.ABAR chloroplast envelope-localized receptor CCH1, GUN5, CHLH, CCH, ABAR 0.8709059922953399 48 Smo96266 Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana 0.8697351327563935 40 Smo160384 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.869502451436834 63 Smo109271 Phytohormones.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE family.CLE precursor protein 0.8691576669977952 42 Smo270566 Photosynthesis.photorespiration.serine hydroxymethyltransferase STM, SHM1, SHMT1 0.8682139615913272 53 Smo415599 0.8648860602365716 44 Smo83798 0.8630646654928532 75 Smo172950 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-4 motor protein FRA1 0.863042613099047 47 Smo11420 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VIII kinase 0.862416199189726 48 Smo10032 Protein TSS OS=Arabidopsis thaliana 0.8620786775345775 49 Smo173134 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease SPPA1, SPPA 0.8605596009691291 56 Smo228964 Amino acid metabolism.biosynthesis.aspartate family.asparagine.asparagine aminotransaminase AGT1, SGAT, AGT 0.8599189385393131 51 Smo63552 Cytochrome P450 77A2 OS=Solanum melongena CYP77A4 0.859140309224649 52 Smo405166 Cytochrome P450 704B1 OS=Arabidopsis thaliana CYP704B1 0.8589736075766351 53 Smo21211 Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana 0.8567888170219593 91 Smo121095 Coenzyme metabolism.lipoic acid synthesis.lipoate synthase LIP1 0.8565177484013682 81 Smo448423 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein ZKT 0.8563095147042634 57 Smo421452 0.8540639418889487 58 Smo178716 Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana 0.8539746314052763 59 Smo428906 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor APRR2, PRR2 0.8526588850286666 60 Smo420542 0.8524553467555093 61 Smo405045 External stimuli response.temperature.Csd (cold-shock-domain) protein ATCRE1, WOL, CRE1, AHK4, WOL1 0.8520669853834753 62 Smo441980 0.8506732909520945 66 Smo149244 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter KUP11 0.8495447961709699 65 Smo267533 Cellular respiration.glycolysis.plastidial glycolysis.phosphoglycerate kinase 0.8488226792340475 66 Smo31438 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.847235772664588 67 Smo266585 Photosynthesis.photorespiration.glycolate oxidase 0.8468823315137594 68 Smo440870 0.8462749997667011 89 Smo170150 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase ATATH8 0.8453701280637788 87 Smo121309 0.8440699027767745 73 Smo88976 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter 0.8439801815078757 74 Smo426174 0.8428411519234053 76 Smo178158 Enzyme classification.EC_1 oxidoreductases.EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)(50.1.12 : 906.0) & Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana LOX3 0.8423943398577531 77 Smo169553 0.8422100610054692 96 Smo88313 BTB/POZ domain and ankyrin repeat-containing protein NPR1 OS=Oryza sativa subsp. indica ATNPR3, NPR3 0.8416941654441574 80 Smo103361 0.8412902166585567 100 Smo409247 Protein modification.phosphorylation.PEK kinase RUP2 0.8407603727633823 82 Smo443865 0.8399291378510114 83 Smo107811 0.8383618086651522 84 Smo442478 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8371841672063105 85 Smo165469 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase ATCCD1, CCD1, NCED1, ATNCED1 0.836725021014169 86 Smo104195 Cytochrome P450 CYP72A219 OS=Panax ginseng CYP72B1, CYP734A1, BAS1 0.8366321434723679 88 Smo446491 0.8366264110002818 89 Smo272238 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component 0.8353826819673213 90 Smo102513 Carbonic anhydrase OS=Flaveria bidentis BCA4, CA4, ATBCA4 0.8350254059108378 91 Smo266613 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase LYC 0.8346960907755152 92 Smo231444 0.8317945337544985 93 Smo82002 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF152 transcript stability factor CRM3, HCF152 0.8302517427513384 95 Smo174988 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.one-helix LHC-related protein group.OHP2 protein OHP2 0.830147058173491 96 Smo96351 DNA damage response.DNA repair mechanisms.photoreactivation.class II photolyase (PHR1) UVR2, PHR1 0.8292481810177161 98 Smo414574 (E)-2-epi-beta-caryophyllene synthase OS=Selaginella moellendorffii 0.8289832443405823 99 Smo231708 Solute transport.channels.CorA family.MRS/MGT metal cation transporter MGT10, GMN10, MRS2-11, ATMGT10 0.8271842533221352 100