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  5. Smo443671

Smo443671


Description : Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana


Gene families : OG0003804 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo443671

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00038450 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.02 OrthoFinder output from all 47 species
AT5G27970 No alias ARM repeat superfamily protein 0.1 OrthoFinder output from all 47 species
Ala_g12532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05143 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g29508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60178.t1 Aspi01Gene60178 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60185.t1 Aspi01Gene60185 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.17G014700.1 Ceric.17G014700 not classified & original description: pacid=50618267... 0.05 OrthoFinder output from all 47 species
Cre13.g575250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g23620 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00991 No alias subgroup ERF-X transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021873001 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.1 OrthoFinder output from all 47 species
Gb_33881 No alias Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
LOC_Os01g56590.1 LOC_Os01g56590 Brefeldin A-inhibited guanine nucleotide-exchange... 0.06 OrthoFinder output from all 47 species
Len_g12955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10436382g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_734099g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp6g05240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g37399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc09g018340.2.1 Solyc09g018340 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g018370.4.1 Solyc09g018370 Brefeldin A-inhibited guanine nucleotide-exchange... 0.08 OrthoFinder output from all 47 species
Spa_g21400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019674_P001 Zm00001e019674 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019677_P001 Zm00001e019677 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019681_P002 Zm00001e019681 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR032629 DCB_dom 3 171
No external refs found!