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  5. Smo442673

Smo442673


Description : Nutrient uptake.iron uptake.iron storage.PIC-type iron transporter


Gene families : OG0004309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo442673
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Adi_g016400 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014488 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.04 OrthoFinder output from all 47 species
Cba_g37905 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Dac_g10048 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Dcu_g04144 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species
Mp6g08800.1 No alias Clustered mitochondria protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Msp_g16225 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.03 OrthoFinder output from all 47 species
Solyc01g086750.4.1 Solyc01g086750 Clustered mitochondria protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g17559 No alias regulatory protein *(FRIENDLY) of mitochondrion division... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025697 CLU_dom 509 794
No external refs found!