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  5. Smo441216

Smo441216 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A

Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo441216
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Als_g55315 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Aop_g39112 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000823.19 ATRPA70A, RPA1A,... Cell cycle.mitosis and meiosis.meiotic recombination.DNA... 0.02 OrthoFinder output from all 47 species
Dde_g30616 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Ehy_g25492 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Gb_20429 ATRPA70A, RPA1A,... component RPA1 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
LOC_Os02g53680.1 ATRPA70A, RPA1A,... component RPA1 of single-stranded-DNA binding RPA... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008804 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Sam_g50032 No alias component *(RPA1) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Solyc08g075840.3.1 Solyc08g075840 component RPA1 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species
Zm00001e023770_P001 ATRPA70A, RPA1A,... component RPA1 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR031657 REPA_OB_2 397 501
No external refs found!