Sequence Description Alias PCC hrr Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.9501280791001122 4 Smo405878 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase LDL3 0.9431614374083669 19 Smo440912 0.941565328180638 5 Smo164675 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone GTB1 0.9368044952324593 23 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component ATMED14, MED14, SWP 0.9294384110116809 36 Smo443682 Uncharacterized protein At4g19900 OS=Arabidopsis thaliana 0.9294368400865171 6 Smo410730 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.9282007187186095 16 Smo443140 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana MOS1 0.9261923597847062 45 Smo437976 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.9246922214593113 12 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9243791785572565 10 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.922272545824502 11 Smo180368 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor HAC12 0.9218113336782063 40 Smo70578 0.9215564547514904 42 Smo173562 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component THO2, AtTHO2 0.9213982923152275 50 Smo437689 Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica 0.9200216665798764 41 Smo2133 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.918271824114447 16 Smo31929 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana 0.9162154632777615 17 Smo406046 0.9161389860467573 50 Smo438614 0.9141261642581655 25 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9141144005391334 31 Smo441953 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component CCT, CRP 0.914053696855916 43 Smo1983 Pumilio homolog 1 OS=Arabidopsis thaliana APUM4, PUM4 0.9129781337153235 22 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL6 0.9119672695240669 59 Smo441701 0.9117266797141553 24 Smo438348 Protein MEI2-like 5 OS=Arabidopsis thaliana AML5, ML5 0.9115317542999323 25 Smo440052 0.9096528208583122 43 Smo440913 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin SCC2, ATSCC2, EMB2773 0.9092924037635686 42 Smo407119 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.9090254221280916 48 Smo175932 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL phosphatase BSL3 0.9076879921274398 45 Smo50132 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana HVT1, ATVT-1 0.9071604178975763 30 Smo182327 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component 0.9069439562347579 85 Smo107792 0.9061661308039658 32 Smo442417 0.9052016099742821 94 Smo98006 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.CUL3 scaffold component ATCUL3A, ATCUL3, CUL3A, CUL3 0.9049841728614045 34 Smo60241 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.9045274189744975 36 Smo444069 0.9042817033774755 36 Smo173603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component EMB33, SUS2, EMB177, EMB14 0.9028744799299965 50 Smo88336 0.9012133614908431 70 Smo86139 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component 0.9001617917688383 78 Smo74297 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component 0.9000926821907138 40 Smo171199 Multi-process regulation.TOR signalling pathway.TORC complex.RAPTOR regulatory component RAPTOR1, ATRAPTOR1B, RAPTOR1B 0.8998426142187891 48 Smo236021 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease EMB80, EMB1275, DEK1, ATDEK1 0.8992629212930494 42 Smo170139 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.8989730266709732 80 Smo447924 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component GCT 0.8982400347358868 44 Smo444050 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor ATINO80, INO80 0.8981698056648846 87 Smo170207 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component SPT16 0.8963344827099435 46 Smo447947 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3 0.8959174572943216 79 Smo440558 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana PKL, GYM, CHR6, SSL2, CHD3 0.8956865023978174 48 Smo440060 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.8952195008692301 79 Smo96808 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG6-type DNA ligase 0.8948693563092817 56 Smo432361 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component SDG2, ATXR3 0.8942992091882616 56 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.8934560882057719 52 Smo110201 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 RNA_POL_II_LSRNA_POL_II_LS, NRPB1, RPB1, RNA_POL_II_LS 0.8923811785311359 68 Smo441325 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ZC11A component 0.8922761146726734 54 Smo447032 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease UBP12 0.8903656457944169 83 Smo88215 Protein modification.phosphorylation.atypical kinase families.PIKK kinase TOR 0.8899995992941696 58 Smo438861 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component 0.8892158108986243 96 Smo110102 0.8887269037202918 58 Smo154179 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase UPL2 0.8886367027985261 67 Smo439148 0.8879722477273413 77 Smo438226 0.8877019957583777 61 Smo169732 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.non-canonical heterotrimeric G-protein complex.XLG atypical G-alpha component XLG3 0.886829819889973 75 Smo144158 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase emb1507 0.8864596534002199 64 Smo440969 0.8860856332174538 74 Smo411870 Polyadenylate-binding protein-interacting protein 4 OS=Arabidopsis thaliana CID4 0.8860351732556055 66 Smo161477 Transcriptional repressor ILP1 OS=Arabidopsis thaliana ILP1 0.885589988044692 67 Smo79402 0.8836659323436175 68 Smo439915 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor TPR1 0.8830319981360752 70 Smo169694 0.8822588935351396 71 Smo420183 RNA biosynthesis.transcriptional activation.Trihelix transcription factor 0.8812550279710413 74 Smo443317 Disease resistance response protein 206 OS=Pisum sativum 0.8805953258959823 73 Smo79692 Protein RMD5 homolog OS=Arabidopsis thaliana 0.8801566720270426 74 Smo439131 0.877834237376949 76 Smo156885 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) KEG 0.8772103328699347 77 Smo428704 0.876406161072671 79 Smo110655 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana EMB976 0.8756777684675859 80 Smo409957 Protein modification.phosphorylation.atypical kinase families.TAF kinase HAF01, HAC13, TAF1, HAF1, GTD1 0.8740032091487903 84 Smo449066 TITAN-like protein OS=Arabidopsis thaliana 0.8723754065660868 88 Smo445664 0.8720244205553829 89 Smo84578 Protein PHLOEM PROTEIN 2-LIKE A10 OS=Arabidopsis thaliana CF9 0.8706815090311664 98 Smo181353 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type PUB13, ATPUB13 0.8703746879241564 99