Smo439163 (HSP93-V, DCA1,...)

Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo439163

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00164160	HSP93-V, DCA1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
AMTR_s00110p00042430	CLPB3, CLPB-P,...	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
AT5G50920	HSP93-V, DCA1,...	CLPC homologue 1	0.03	OrthoFinder output from all 47 species
Adi_g010878	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g05486	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Ala_g11691	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.05	OrthoFinder output from all 47 species
Ala_g12182	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.05	OrthoFinder output from all 47 species
Als_g16086	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06718	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Aob_g21747	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04072	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Ceric.07G005700.1	CLPB3, CLPB-P,...	organellar chaperone *(Clp-p/Clp-m) & original...	0.03	OrthoFinder output from all 47 species
Ceric.18G061200.1	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000655.28	HSP93-V, DCA1,...	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Cre12.g533351	CLPB3, CLPB-P, APG6	Chaperone protein ClpB3, chloroplastic OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g14360	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Dde_g24879	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Ehy_g21280	HSP93-V, DCA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os04g32560.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
LOC_Os12g12850.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
Len_g14887	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Lfl_g02311	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
MA_596288g0010	HSP93-V, DCA1,...	Chaperone protein ClpC1, chloroplastic OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_8117g0010	HSP93-V, DCA1,...	ATP-dependent Clp protease ATP-binding subunit ClpA...	0.02	OrthoFinder output from all 47 species
Msp_g05637	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Ore_g13933	HSP93-V, DCA1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g16601	No alias	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Sam_g19448	No alias	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g118340.3.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Solyc12g042060.3.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.04	OrthoFinder output from all 47 species
Spa_g19032	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Spa_g46302	CLPB3, CLPB-P, APG6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g47608	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
Tin_g10070	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Zm00001e008312_P001	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.04	OrthoFinder output from all 47 species
Zm00001e040778_P001	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	309	425

External Links

No external refs found!

Smo439163 (HSP93-V, DCA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation