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  5. Smo421325

Smo421325


No description available


Gene families : OG0002233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo421325

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00265580 evm_27.TU.AmTr_v1... DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00018p00168540 evm_27.TU.AmTr_v1... DNA mismatch repair protein MSH1, mitochondrial... 0.03 OrthoFinder output from all 47 species
Ceric.34G068900.1 Ceric.34G068900 not classified & original description: pacid=50624175... 0.05 OrthoFinder output from all 47 species
Ehy_g12779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g58410.1 LOC_Os04g58410 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g03377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g11550.1 No alias DNA mismatch repair protein MSH1, mitochondrial... 0.03 OrthoFinder output from all 47 species
Sam_g13786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006512_P001 Zm00001e006512 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 422 485
No external refs found!