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  5. Smo419323

Smo419323


Description : Cellular respiration.tricarboxylic acid cycle.succinyl-CoA ligase dimer.beta subunit


Gene families : OG0004314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004314_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo419323
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT2G20420 No alias ATP citrate lyase (ACL) family protein 0.08 OrthoFinder output from all 47 species
Adi_g018768 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.02 OrthoFinder output from all 47 species
Azfi_s0073.g037105 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Cba_g00954 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Ceric.13G077600.1 Ceric.13G077600 subunit beta of succinyl-CoA ligase heterodimer &... 0.07 OrthoFinder output from all 47 species
Dcu_g04664 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.07 OrthoFinder output from all 47 species
Dde_g20883 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028373001 No alias Cellular respiration.tricarboxylic acid... 0.04 OrthoFinder output from all 47 species
Gb_21325 No alias subunit beta of succinyl-CoA ligase heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os02g40830.1 LOC_Os02g40830 subunit beta of succinyl-CoA ligase heterodimer 0.1 OrthoFinder output from all 47 species
Mp1g04210.1 No alias subunit beta of succinyl-CoA ligase heterodimer 0.05 OrthoFinder output from all 47 species
Msp_g04849 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.07 OrthoFinder output from all 47 species
Nbi_g02039 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Pp3c20_5640V3.1 Pp3c20_5640 ATP citrate lyase (ACL) family protein 0.02 OrthoFinder output from all 47 species
Sam_g06754 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.03 OrthoFinder output from all 47 species
Sam_g38847 No alias subunit beta of succinyl-CoA ligase heterodimer &... 0.01 OrthoFinder output from all 47 species
Solyc06g083790.3.1 Solyc06g083790 subunit beta of succinyl-CoA ligase heterodimer 0.08 OrthoFinder output from all 47 species
Zm00001e015140_P001 Zm00001e015140 subunit beta of succinyl-CoA ligase heterodimer 0.03 OrthoFinder output from all 47 species
Zm00001e023009_P001 Zm00001e023009 subunit beta of succinyl-CoA ligase heterodimer 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 40 248
No external refs found!