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  5. Smo410500

Smo410500


Description : RNA biosynthesis.transcriptional repression.TIE/SPL transcriptional repressor


Gene families : OG0008911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008911_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo410500
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cba_g62340 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03744 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g20550 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g43793 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g00931 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012255 No alias transcriptional repressor *(TIE/SPL) & original... 0.05 OrthoFinder output from all 47 species
Spa_g21538 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR014855 NOZZLE 11 50
No external refs found!