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  5. Smo267638

Smo267638


Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-alpha component


Gene families : OG0003497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo267638
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Cre12.g490000 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
LOC_Os03g18510.1 LOC_Os03g18510 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Lfl_g01263 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
MA_10428764g0010 No alias component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Spa_g07806 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Spa_g25613 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Tin_g01777 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.02 OrthoFinder output from all 47 species
Zm00001e038398_P001 Zm00001e038398 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011488 TIF_2_asu 127 257
No external refs found!