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  5. Smo173646

Smo173646


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor


Gene families : OG0001094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo173646

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00145800 evm_27.TU.AmTr_v1... Brefeldin A-inhibited guanine nucleotide-exchange... 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00031550 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 OrthoFinder output from all 47 species
AMTR_s00131p00043500 ATMIN7, BEN1,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT1G01960 EDA10 SEC7-like guanine nucleotide exchange family protein 0.12 OrthoFinder output from all 47 species
AT3G43300 ATMIN7, BEN1 HOPM interactor 7 0.13 OrthoFinder output from all 47 species
AT3G60860 No alias SEC7-like guanine nucleotide exchange family protein 0.11 OrthoFinder output from all 47 species
AT4G35380 No alias SEC7-like guanine nucleotide exchange family protein 0.02 OrthoFinder output from all 47 species
AT4G38200 No alias SEC7-like guanine nucleotide exchange family protein 0.09 OrthoFinder output from all 47 species
Adi_g019376 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Adi_g073604 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01609 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Aev_g05544 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Aev_g18005 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ala_g02716 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Ala_g11392 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Als_g01210 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.06 OrthoFinder output from all 47 species
Aob_g07437 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
Aspi01Gene06196.t1 ATMIN7, BEN1,... ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g013898 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0048.g030483 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Cba_g01354 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ceric.35G045800.1 ATMIN7, BEN1,... ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.23 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g10762 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Dde_g21336 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01014993001 ATMIN7, BEN1 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
GSVIVT01027623001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Gb_04048 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.03 OrthoFinder output from all 47 species
Gb_07642 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Gb_26513 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.07 OrthoFinder output from all 47 species
LOC_Os02g10040.1 LOC_Os02g10040 Brefeldin A-inhibited guanine nucleotide-exchange... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14260.1 LOC_Os03g14260 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
LOC_Os07g37750.1 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Len_g10327 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Len_g23975 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Lfl_g02471 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.07 OrthoFinder output from all 47 species
MA_10429864g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
MA_157279g0010 EDA10 Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
MA_20138g0010 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
MA_20138g0020 ATMIN7, BEN1 Brefeldin A-inhibited guanine nucleotide-exchange... 0.04 OrthoFinder output from all 47 species
MA_20563g0010 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
Mp7g11590.1 ATMIN7, BEN1 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.04 OrthoFinder output from all 47 species
Mp8g18220.1 No alias BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.08 OrthoFinder output from all 47 species
Msp_g13471 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Nbi_g01508 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Ore_g16676 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Ore_g29633 EDA10 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ore_g30550 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Pnu_g09409 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Ppi_g01418 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010565 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012257 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018598 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.05 OrthoFinder output from all 47 species
Sam_g11624 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.04 OrthoFinder output from all 47 species
Sam_g29233 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.03 OrthoFinder output from all 47 species
Solyc01g091460.3.1 Solyc01g091460 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Solyc01g112340.3.1 Solyc01g112340 Brefeldin A-inhibited guanine nucleotide-exchange... 0.05 OrthoFinder output from all 47 species
Solyc01g112350.3.1 Solyc01g112350 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species
Solyc12g017830.3.1 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Tin_g02915 ATMIN7, BEN1 ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Tin_g03558 No alias ARF-GTPase guanyl-nucleotide exchange factor *(BIG) &... 0.02 OrthoFinder output from all 47 species
Zm00001e001058_P001 Zm00001e001058 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Zm00001e010568_P001 ATMIN7, BEN1,... BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.05 OrthoFinder output from all 47 species
Zm00001e037574_P001 Zm00001e037574 BIG-type ARF-GTPase guanyl-nucleotide exchange factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR032817 Mon2_C 1282 1409
No external refs found!